Stars
NAMD - a parallel, object-oriented molecular dynamics code
Annotates genes on putative phage contigs with protein orthologous groups using PHROGs
A genome diagram generator for microbes and organelles
📊 The concise and progressive visualization grammar.
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A set of ready to use Agent Skills for research, science, engineering, analysis, finance and writing.
Pipeline to create phage genome synteny graphics from genbank files
Universal and efficient structure-based core gene phylogeny with Foldseek and ProstT5
🤝 Tool for mining KEGG pathways completeness data from eggNOG-mapper annotations
A genome visualization python package for comparative genomics
Predict the function of phage hypothetical proteins using an LSTM model trained with Phage Synteny
Assembling phage particles one protein at a time
Distilled and Refined Annotation of Metabolism: A tool for the annotation and curation of function for microbial and viral genomes
A listing of software, tools and databases useful for virome analysis
Workflow to assign Taxonomy to a bacteriophage genome isolate
iLund4u is a bioinformatics tool for search and annotation of hotspots in a large set of proteomes.
Providing up-to-date phage genome databases, metrics and useful input files for a number of bioinformatic pipelines.